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SRX3771481: RNA-Seq of A. thaliana: 24h wounded leaf_Rep3
1 ILLUMINA (Illumina HiSeq 2500) run: 15.1M spots, 757M bases, 291.4Mb downloads

Design: RNA was extracted using TRIzol Reagent and the RNA-seq libraries were generated using an Illumina TruSeq Stranded Total RNA Kit with Ribo-Zero Plant
Submitted by: University of Chicago
Study: The molecular genetic basis of herbivory between butterflies and their host-plants
show Abstracthide Abstract
Here we use multiple genome-wide approaches to map the molecular basis of herbivory from both plant and insect perspectives, focusing on butterflies and their larval host-plants. Parallel genome-wide association studies in the Cabbage White butterfly, Pieris rapae, and its host-plant, Arabidopsis thaliana, pinpointed a small number of butterfly and plant genes that influenced herbivory. These genes, along with much of the genome, were regulated in a dynamic way over the time course of the feeding interaction. Comparative analyses, including diverse butterfly/plant systems, showed a variety of genome-wide responses to herbivory, yet a core set of highly conserved genes in butterflies as well as their host-plants. These results greatly expand our understanding of the genomic causes and evolutionary consequences of ecological interactions across two of Nature's most diverse taxa, butterflies and flowering plants.
Sample:
SAMN08647219 • SRS3025976 • All experiments • All runs
Library:
Name: Sample_MK36
Instrument: Illumina HiSeq 2500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: Inverse rRNA
Layout: SINGLE
Links:
Runs: 1 run, 15.1M spots, 757M bases, 291.4Mb
Run# of Spots# of BasesSizePublished
SRR681450815,139,341757M291.4Mb2018-08-07

ID:
5200160

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